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  1. Portal
  2. POR-2989

Too eager basionym merging during nub builds?

    Details

    • Type: Improvement Improvement
    • Status: Closed
    • Priority: Blocker Blocker
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: None
    • Component/s: Checklistbank
    • Labels:

      Description

      When building the nub using just the Mantodea checklist we yield more synonymised recombinations of basionyms as in the original, even though it is a very well curated experts dataset with basionym information:

      http://www.gbif.org/dataset/99948a8b-63b2-41bf-9d10-6e007e967789

      SOURCE Mantodea:
      Hymenopodidae [family]
        Galinthias meruensis Sjostedt, 1909 [species]
          *Galinthias usambarica Sjostedt, 1909 [species]
        Oxypiloidea (Catasigerpes) nigericus (Giglio-Tos, 1915) [species]
        Oxypilus (Anoxypilus) meruensis (Sjostedt, 1909) [species]
          *Oxypilus (Anoxypilus) nigericus (Beier, 1930) [species]
        Pseudoharpax nigericus Giglio-Tos, 1915 [species]
      
      
      NUB:
      Hymenopodidae [family]
        $Galinthias meruensis Sjostedt, 1909 [species]
          *Galinthias usambarica Sjostedt, 1909 [species]
          *Oxypilus meruensis (Sjostedt, 1909) [species]
          *Oxypilus nigericus (Beier, 1930) [species]
        $Pseudoharpax nigericus Giglio-Tos, 1915 [species]
          *Oxypiloidea nigericus (Giglio-Tos, 1915) [species]
      

      Investigate whether this additional nub grouping could actually be correct or clearly is an error. If it is an error we need to think about how to avoid them. Currently we detect basionyms within a family which might be too eager

        Gliffy Diagrams

        Issue Links

          Activity

          Markus Döring created issue -
          Markus Döring made changes -
          Field Original Value New Value
          Epic Link POR-2467 [ 16502 ]
          Markus Döring made changes -
          Description When building the nub using just the Mantodea checklist we yield more synonymised recombinations of basionyms as in the original, even though it is a very well curated experts dataset with basionym information:

          http://www.gbif.org/dataset/99948a8b-63b2-41bf-9d10-6e007e967789

          ´´´
          SOURCE Mantodea:
          Hymenopodidae [family]
            Galinthias meruensis Sjostedt, 1909 [species]
              *Galinthias usambarica Sjostedt, 1909 [species]
            Oxypiloidea (Catasigerpes) nigericus (Giglio-Tos, 1915) [species]
            Oxypilus (Anoxypilus) meruensis (Sjostedt, 1909) [species]
              *Oxypilus (Anoxypilus) nigericus (Beier, 1930) [species]
            Pseudoharpax nigericus Giglio-Tos, 1915 [species]


          NUB:
          Hymenopodidae [family]
            $Galinthias meruensis Sjostedt, 1909 [species]
              *Galinthias usambarica Sjostedt, 1909 [species]
              *Oxypilus meruensis (Sjostedt, 1909) [species]
              *Oxypilus nigericus (Beier, 1930) [species]
            $Pseudoharpax nigericus Giglio-Tos, 1915 [species]
              *Oxypiloidea nigericus (Giglio-Tos, 1915) [species]
          ´´´

          Investigate whether this additional nub grouping could actually be correct or clearly is an error. If it is an error we need to think about how to avoid them. Currently we detect basionyms within a family which might be too eager
          When building the nub using just the Mantodea checklist we yield more synonymised recombinations of basionyms as in the original, even though it is a very well curated experts dataset with basionym information:

          http://www.gbif.org/dataset/99948a8b-63b2-41bf-9d10-6e007e967789

          {quote}
          SOURCE Mantodea:
          Hymenopodidae [family]
            Galinthias meruensis Sjostedt, 1909 [species]
              *Galinthias usambarica Sjostedt, 1909 [species]
            Oxypiloidea (Catasigerpes) nigericus (Giglio-Tos, 1915) [species]
            Oxypilus (Anoxypilus) meruensis (Sjostedt, 1909) [species]
              *Oxypilus (Anoxypilus) nigericus (Beier, 1930) [species]
            Pseudoharpax nigericus Giglio-Tos, 1915 [species]


          NUB:
          Hymenopodidae [family]
            $Galinthias meruensis Sjostedt, 1909 [species]
              *Galinthias usambarica Sjostedt, 1909 [species]
              *Oxypilus meruensis (Sjostedt, 1909) [species]
              *Oxypilus nigericus (Beier, 1930) [species]
            $Pseudoharpax nigericus Giglio-Tos, 1915 [species]
              *Oxypiloidea nigericus (Giglio-Tos, 1915) [species]
          {quote}

          Investigate whether this additional nub grouping could actually be correct or clearly is an error. If it is an error we need to think about how to avoid them. Currently we detect basionyms within a family which might be too eager
          Markus Döring made changes -
          Description When building the nub using just the Mantodea checklist we yield more synonymised recombinations of basionyms as in the original, even though it is a very well curated experts dataset with basionym information:

          http://www.gbif.org/dataset/99948a8b-63b2-41bf-9d10-6e007e967789

          {quote}
          SOURCE Mantodea:
          Hymenopodidae [family]
            Galinthias meruensis Sjostedt, 1909 [species]
              *Galinthias usambarica Sjostedt, 1909 [species]
            Oxypiloidea (Catasigerpes) nigericus (Giglio-Tos, 1915) [species]
            Oxypilus (Anoxypilus) meruensis (Sjostedt, 1909) [species]
              *Oxypilus (Anoxypilus) nigericus (Beier, 1930) [species]
            Pseudoharpax nigericus Giglio-Tos, 1915 [species]


          NUB:
          Hymenopodidae [family]
            $Galinthias meruensis Sjostedt, 1909 [species]
              *Galinthias usambarica Sjostedt, 1909 [species]
              *Oxypilus meruensis (Sjostedt, 1909) [species]
              *Oxypilus nigericus (Beier, 1930) [species]
            $Pseudoharpax nigericus Giglio-Tos, 1915 [species]
              *Oxypiloidea nigericus (Giglio-Tos, 1915) [species]
          {quote}

          Investigate whether this additional nub grouping could actually be correct or clearly is an error. If it is an error we need to think about how to avoid them. Currently we detect basionyms within a family which might be too eager
          When building the nub using just the Mantodea checklist we yield more synonymised recombinations of basionyms as in the original, even though it is a very well curated experts dataset with basionym information:

          http://www.gbif.org/dataset/99948a8b-63b2-41bf-9d10-6e007e967789

          {noformat}
          SOURCE Mantodea:
          Hymenopodidae [family]
            Galinthias meruensis Sjostedt, 1909 [species]
              *Galinthias usambarica Sjostedt, 1909 [species]
            Oxypiloidea (Catasigerpes) nigericus (Giglio-Tos, 1915) [species]
            Oxypilus (Anoxypilus) meruensis (Sjostedt, 1909) [species]
              *Oxypilus (Anoxypilus) nigericus (Beier, 1930) [species]
            Pseudoharpax nigericus Giglio-Tos, 1915 [species]


          NUB:
          Hymenopodidae [family]
            $Galinthias meruensis Sjostedt, 1909 [species]
              *Galinthias usambarica Sjostedt, 1909 [species]
              *Oxypilus meruensis (Sjostedt, 1909) [species]
              *Oxypilus nigericus (Beier, 1930) [species]
            $Pseudoharpax nigericus Giglio-Tos, 1915 [species]
              *Oxypiloidea nigericus (Giglio-Tos, 1915) [species]
          {noformat}

          Investigate whether this additional nub grouping could actually be correct or clearly is an error. If it is an error we need to think about how to avoid them. Currently we detect basionyms within a family which might be too eager
          Markus Döring made changes -
          Epic Link POR-2467 [ 16502 ] POR-3029 [ 18226 ]
          Markus Döring made changes -
          Link This issue blocks PF-2387 [ PF-2387 ]
          Markus Döring made changes -
          Assignee Markus Döring [ mdoering@gbif.org ]
          Markus Döring made changes -
          Link This issue blocks PF-2475 [ PF-2475 ]
          Markus Döring made changes -
          Link This issue blocks PF-2481 [ PF-2481 ]
          Markus Döring made changes -
          Labels nub basionym nub
          Markus Döring made changes -
          Link This issue relates to PF-2514 [ PF-2514 ]
          Markus Döring made changes -
          Link This issue blocks PF-2513 [ PF-2513 ]
          Markus Döring made changes -
          Link This issue relates to POR-398 [ POR-398 ]
          Markus Döring made changes -
          Priority Major [ 3 ] Critical [ 2 ]
          Markus Döring made changes -
          Priority Critical [ 2 ] Blocker [ 1 ]
          Markus Döring made changes -
          Issue Type Bug [ 1 ] Improvement [ 4 ]
          Markus Döring made changes -
          Link This issue relates to POR-2794 [ POR-2794 ]
          Markus Döring made changes -
          Status Open [ 1 ] In Progress [ 3 ]
          Markus Döring made changes -
          Attachment nub-synonyms.log.zip [ 14502 ]
          Attachment nub-synonyms.txt.zip [ 14501 ]
          Markus Döring made changes -
          Attachment nub-synonyms.txt.zip [ 14501 ]
          Markus Döring made changes -
          Attachment nub-synonyms.log.zip [ 14502 ]
          Markus Döring made changes -
          Attachment nub-synonyms.log.zip [ 14504 ]
          Attachment nub-synonyms.txt.zip [ 14503 ]
          Markus Döring made changes -
          Resolution Fixed [ 1 ]
          Status In Progress [ 3 ] Closed [ 6 ]
          Markus Döring made changes -
          Link This issue blocks PF-2552 [ PF-2552 ]
          Markus Döring made changes -
          Link This issue blocks PF-2514 [ PF-2514 ]
          Markus Döring made changes -
          Link This issue relates to PF-2514 [ PF-2514 ]

            People

            • Assignee:
              Markus Döring
              Reporter:
              Markus Döring
            • Votes:
              0 Vote for this issue
              Watchers:
              2 Start watching this issue

              Dates

              • Created:
                Updated:
                Resolved: