Issue 17419

Problem with Linaria pedunculata occurrences

17419
Reporter: herbariomgc
Assignee: mdoering
Type: Bug
Summary: Problem with Linaria pedunculata occurrences
Resolution: Fixed
Status: Closed
Created: 2015-03-13 11:01:10.009
Updated: 2015-04-23 09:24:03.099
Resolved: 2015-04-01 14:45:47.165
        
        
Description: Hi,
All our ocurrrences of Linaria pedunculata have been interpreted as Lyperia pedunculata and is a big mistake.
All the ocurrences: http://www.gbif.org/occurrence/search?taxon_key=5560667&dataset_key=962cceea-f762-11e1-a439-00145eb45e9a
A verbatim example: http://www.gbif.org/occurrence/910446621/verbatim

Please, check the backbone taxonomy and fix it.
Thank you very much

*Reporter*: Jose Garcia
*E-mail*: [mailto:herbariomgc@uma.es]]]>
    


Author: thirsch@gbif.org
Comment: Not sure why this has been assigned to me. Markus could you look into it please?
Created: 2015-03-13 11:20:32.542
Updated: 2015-03-13 11:20:32.542


Author: mdoering@gbif.org
Comment: yes Tim, I will. I think all new feedback issues get assigned to you automatically. Probably not the right thing to do, Ill make it unassigned instead. Unless we can think of someone who is elected to review all feedback issues when they come in
Created: 2015-03-13 11:23:18.784
Updated: 2015-03-13 11:23:18.784


Author: mdoering@gbif.org
Comment: The default was unassigned, no idea why you got it...
Created: 2015-03-13 11:25:32.152
Updated: 2015-03-13 11:25:32.152


Author: mdoering@gbif.org
Created: 2015-03-13 11:30:50.037
Updated: 2015-03-13 11:30:50.037
        
As expected this is a nub lookup problem:
http://api.gbif.org/v1/species/match?family=Scrophulariaceae&name=Linaria%20pedunculata%20(L.)%20Chaz.

All open species match issues:
http://dev.gbif.org/issues/issues?filter=12900

This issue should be fixed once we implement the 2 step species match:
http://dev.gbif.org/issues/browse/POR-2469
    


Author: thirsch@gbif.org
Comment: [~mdoering@gbif.org] will you respond directly to the reporter summarising how it is being addressed?
Created: 2015-03-13 11:46:34.67
Updated: 2015-03-13 11:46:34.67


Author: mdoering@gbif.org
Comment: Yes, writing right now. It wont be fixed soon though
Created: 2015-03-13 12:04:39.726
Updated: 2015-03-13 12:04:39.726


Author: mdoering@gbif.org
Comment: Added clb test: https://github.com/gbif/checklistbank/blob/bf491583e34ed506bf6c5b895f42b15b187b97aa/checklistbank-nub/src/test/java/org/gbif/nub/lookup/NubMatchingServiceImplIT.java#L279
Created: 2015-03-20 14:20:07.497
Updated: 2015-03-20 14:20:07.497


Author: mdoering@gbif.org
Created: 2015-04-01 14:45:47.183
Updated: 2015-04-01 14:45:47.183
        
New lookup returns the family as the only plant genus of Linaria is in a different family:
http://api.gbif.org/v1/species/match?family=Scrophulariaceae&name=Linaria%20pedunculata%20(L.)%20Chaz

If the name is passed in as Plantae without a family you get the genus:
http://api.gbif.org/v1/species/match?kingdom=Plantae&name=Linaria%20pedunculata%20(L.)%20Chaz
    


Author: mdoering@gbif.org
Comment: Finally the interpreted record has also changed: http://www.gbif.org/occurrence/910446621
Created: 2015-04-23 09:24:03.099
Updated: 2015-04-23 09:24:03.099