Severe jersey annotation error in registry logs

18086
Reporter: mdoering
Assignee: cgendreau
Type: Bug
Summary: Severe jersey annotation error in registry logs
Priority: Blocker
Resolution: Fixed
Status: Closed
Created: 2015-12-15 09:34:20.332
Updated: 2015-12-16 17:08:35.226
Resolved: 2015-12-16 17:08:35.202
        
Description: WARNING: A servlet request, to the URI http://apps2.gbif.org/organization/count?callback=jQuery18306838727320215443_1449686862181&_=1449686863813, contains form parameters in the request body but the request body has been consumed
 by the servlet or a servlet filter accessing the request parameters. Only resource methods using @FormParam will work as expected. Resource methods consuming the request body by other means will not work as expected.
Dec 10, 2015 1:22:49 PM com.sun.jersey.spi.container.ContainerResponse logException
SEVERE: Mapped exception to response: 500 (Internal Server Error)
javax.ws.rs.WebApplicationException: com.sun.xml.bind.v2.runtime.IllegalAnnotationsException: 1 counts of IllegalAnnotationExceptions
Class has two properties of the same name "error"
        this problem is related to the following location:
                at public java.lang.String org.gbif.registry.ws.model.ErrorResponse.getError()
                at org.gbif.registry.ws.model.ErrorResponse
        this problem is related to the following location:
                at private java.lang.String org.gbif.registry.ws.model.ErrorResponse.error
                at org.gbif.registry.ws.model.ErrorResponse

        at com.sun.jersey.core.provider.jaxb.AbstractRootElementProvider.writeTo(AbstractRootElementProvider.java:159)
        at com.sun.jersey.spi.container.ContainerResponse.write(ContainerResponse.java:302)
        at com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1510)
        at com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1419)
        at com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1409)
        at com.sun.jersey.spi.container.servlet.WebComponent.service(WebComponent.java:409)
        at com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:558)
        at com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:733)
        at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
        at com.google.inject.servlet.ServletDefinition.doService(ServletDefinition.java:263)
        at com.google.inject.servlet.ServletDefinition.service(ServletDefinition.java:178)
        at com.google.inject.servlet.ManagedServletPipeline.service(ManagedServletPipeline.java:91)
        at com.google.inject.servlet.FilterChainInvocation.doFilter(FilterChainInvocation.java:62)
        at com.google.inject.servlet.ManagedFilterPipeline.dispatch(ManagedFilterPipeline.java:118)
        at com.google.inject.servlet.GuiceFilter.doFilter(GuiceFilter.java:113)
        at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652)
        at org.gbif.registry.ws.filter.StaticContentFilter.doFilter(StaticContentFilter.java:52)
        at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652)
        at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:585)
        at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
        at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:577)
        at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:223)
        at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1127)
        at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:515)
        at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:185)
        at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1061)
        at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
        at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:215)
        at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:97)
        at org.eclipse.jetty.server.Server.handle(Server.java:497)
        at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:310)
        at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:245)
        at org.eclipse.jetty.io.AbstractConnection$2.run(AbstractConnection.java:540)
        at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:635)
        at org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(QueuedThreadPool.java:555)
        at java.lang.Thread.run(Thread.java:745)
Caused by: com.sun.xml.bind.v2.runtime.IllegalAnnotationsException: 1 counts of IllegalAnnotationExceptions
Class has two properties of the same name "error"
        this problem is related to the following location:
                at public java.lang.String org.gbif.registry.ws.model.ErrorResponse.getError()
                at org.gbif.registry.ws.model.ErrorResponse
        this problem is related to the following location:
                at private java.lang.String org.gbif.registry.ws.model.ErrorResponse.error
                at org.gbif.registry.ws.model.ErrorResponse
       at com.sun.xml.bind.v2.runtime.IllegalAnnotationsException$Builder.check(IllegalAnnotationsException.java:106)
        at com.sun.xml.bind.v2.runtime.JAXBContextImpl.getTypeInfoSet(JAXBContextImpl.java:489)
        at com.sun.xml.bind.v2.runtime.JAXBContextImpl.(JAXBContextImpl.java:319)
        at com.sun.xml.bind.v2.runtime.JAXBContextImpl$JAXBContextBuilder.build(JAXBContextImpl.java:1170)
        at com.sun.xml.bind.v2.ContextFactory.createContext(ContextFactory.java:145)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:497)
        at javax.xml.bind.ContextFinder.newInstance(ContextFinder.java:247)
        at javax.xml.bind.ContextFinder.newInstance(ContextFinder.java:234)
        at javax.xml.bind.ContextFinder.find(ContextFinder.java:441)
        at javax.xml.bind.JAXBContext.newInstance(JAXBContext.java:641)
        at javax.xml.bind.JAXBContext.newInstance(JAXBContext.java:584)
        at com.sun.jersey.core.provider.jaxb.AbstractJAXBProvider.getStoredJAXBContext(AbstractJAXBProvider.java:196)
        at com.sun.jersey.core.provider.jaxb.AbstractJAXBProvider.getJAXBContext(AbstractJAXBProvider.java:188)
        at com.sun.jersey.core.provider.jaxb.AbstractJAXBProvider.getMarshaller(AbstractJAXBProvider.java:166)
        at com.sun.jersey.core.provider.jaxb.AbstractJAXBProvider.getMarshaller(AbstractJAXBProvider.java:145)
        at com.sun.jersey.core.provider.jaxb.AbstractRootElementProvider.writeTo(AbstractRootElementProvider.java:151)
        ... 35 more

Dec 11, 2015 11:44:42 AM com.sun.jersey.spi.container.servlet.WebComponent filterFormParameters
WARNING: A servlet request, to the URI http://apps2.gbif.org/dataset/cbb6498e-8927-405a-916b-576d00a6289b?callback=jQuery17105295671925414354_1449830680169&_=1449830682116, contains form parameters in the request body but the request body has been consumed by the servlet or a servlet filter accessing the request parameters. Only resource methods using @FormParam will work as expected. Resource methods consuming the request body by other means will not work as expected.
Dec 12, 2015 10:51:06 PM com.sun.jersey.spi.container.ContainerResponse logException
SEVERE: Mapped exception to response: 500 (Internal Server Error)
javax.ws.rs.WebApplicationException: com.sun.xml.bind.v2.runtime.IllegalAnnotationsException: 1 counts of IllegalAnnotationExceptions
Class has two properties of the same name "error"
        this problem is related to the following location:
                at public java.lang.String org.gbif.registry.ws.model.ErrorResponse.getError()
                at org.gbif.registry.ws.model.ErrorResponse
        this problem is related to the following location:
                at private java.lang.String org.gbif.registry.ws.model.ErrorResponse.error
                at org.gbif.registry.ws.model.ErrorResponse

       at com.sun.jersey.core.provider.jaxb.AbstractRootElementProvider.writeTo(AbstractRootElementProvider.java:159)
        at com.sun.jersey.spi.container.ContainerResponse.write(ContainerResponse.java:302)
        at com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1510)
        at com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1419)
        at com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1409)
        at com.sun.jersey.spi.container.servlet.WebComponent.service(WebComponent.java:409)
        at com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:558)
        at com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:733)
        at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
        at com.google.inject.servlet.ServletDefinition.doService(ServletDefinition.java:263)
        at com.google.inject.servlet.ServletDefinition.service(ServletDefinition.java:178)
        at com.google.inject.servlet.ManagedServletPipeline.service(ManagedServletPipeline.java:91)
        at com.google.inject.servlet.FilterChainInvocation.doFilter(FilterChainInvocation.java:62)
        at com.google.inject.servlet.ManagedFilterPipeline.dispatch(ManagedFilterPipeline.java:118)
        at com.google.inject.servlet.GuiceFilter.doFilter(GuiceFilter.java:113)
        at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652)
        at org.gbif.registry.ws.filter.StaticContentFilter.doFilter(StaticContentFilter.java:52)
        at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652)
        at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:585)
        at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
        at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:577)
        at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:223)
        at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1127)
        at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:515)
        at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:185)
        at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1061)
        at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
        at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:215)
        at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:97)
        at org.eclipse.jetty.server.Server.handle(Server.java:497)
        at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:310)
        at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:245)
        at org.eclipse.jetty.io.AbstractConnection$2.run(AbstractConnection.java:540)
        at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:635)
        at org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(QueuedThreadPool.java:555)
        at java.lang.Thread.run(Thread.java:745)
Caused by: com.sun.xml.bind.v2.runtime.IllegalAnnotationsException: 1 counts of IllegalAnnotationExceptions
Class has two properties of the same name "error"
        this problem is related to the following location:
                at public java.lang.String org.gbif.registry.ws.model.ErrorResponse.getError()
                at org.gbif.registry.ws.model.ErrorResponse
        this problem is related to the following location:
                at private java.lang.String org.gbif.registry.ws.model.ErrorResponse.error
                at org.gbif.registry.ws.model.ErrorResponse
]]>
    

Author: cgendreau
Created: 2015-12-16 11:38:30.128
Updated: 2015-12-16 11:38:30.128
        
Fixed the issue responsible for :
Mapped exception to response: 500 (Internal Server Error)
javax.ws.rs.WebApplicationException: com.sun.xml.bind.v2.runtime.IllegalAnnotationsException: 1 counts of IllegalAnnotationExceptions
Class has two properties of the same name "error"

JAXB will, by default, try to bind all annotated fields and properties which was leading to have "error" bind twice.

https://github.com/gbif/registry/commit/9c95b136952d3255c3105dd39bce1d0861d49e57